Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | HRR99_10490 | P75849 | Negative | 2115630 - 2116325 | 24947.6 |
| duf1236 domain-containing protein | HRR99_10495 | Not Available | Positive | 2116515 - 2117114 | 21581.5 |
| marr family transcriptional regulator | HRR99_10500 | P31078 | Positive | 2117332 - 2117844 | 19435.4 |
| response regulator transcription factor | HRR99_10505 | P31079 | Positive | 2117846 - 2118559 | 26595.0 |
| two-component sensor histidine kinase | HRR99_10510 | Q9HZ47 | Positive | 2118579 - 2119958 | 51483.4 |
| pp_02065 | HRR99_10515 | Not Available | Negative | 2119978 - 2120319 | Not Available |
| pyrroline-5-carboxylate reductase | HRR99_10520 | P22008 | Negative | 2120349 - 2121167 | 27568.7 |
| ybjn domain-containing protein | HRR99_10525 | Not Available | Negative | 2121171 - 2121671 | 18939.4 |
| accessory factor ubik family protein | HRR99_10530 | Not Available | Negative | 2122124 - 2122387 | 9734.38 |
| hypothetical protein | HRR99_10535 | Not Available | Negative | 2122384 - 2122566 | 6546.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

