Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-binding protein | HRR99_10440 | Not Available | Negative | 2106038 - 2107072 | 37310.2 |
| lysr family transcriptional regulator | HRR99_10445 | P52689 | Positive | 2107143 - 2108087 | 34508.8 |
| duf2188 domain-containing protein | HRR99_10450 | Not Available | Negative | 2108102 - 2108377 | 10149.3 |
| calcium:proton antiporter | HRR99_10455 | P55471 | Positive | 2108562 - 2109677 | 39958.7 |
| pyridoxal phosphate-dependent aminotransferase | HRR99_10460 | O86459 | Negative | 2109729 - 2110931 | 43623.3 |
| eal domain-containing protein | HRR99_10465 | P23842 | Positive | 2111193 - 2112110 | 33844.6 |
| hypothetical protein | HRR99_10470 | Not Available | Positive | 2112307 - 2112618 | 11100.8 |
| flagellin | HRR99_10475 | Q52943 | Negative | 2112656 - 2113669 | 36238.8 |
| dmt family transporter | HRR99_10480 | O29470 | Positive | 2113948 - 2114850 | 32062.1 |
| cold-shock protein | HRR99_10485 | P55390 | Positive | 2115293 - 2115508 | 7528.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

