Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | HRR99_10340 | Q8UDF5 | Negative | 2083260 - 2084660 | 49425.9 |
| methyl-accepting chemotaxis protein | HRR99_10345 | G3XD24 | Positive | 2085023 - 2087113 | 73852.8 |
| duf2938 domain-containing protein | HRR99_10350 | Not Available | Positive | 2087410 - 2087904 | 18137.7 |
| zinc metallopeptidase | HRR99_10355 | P64431 | Negative | 2087955 - 2088854 | 32151.4 |
| glutathione s-transferase | HRR99_10360 | Q9P6M1 | Negative | 2088914 - 2089582 | 24865.1 |
| carbamoyl-phosphate synthase large subunit | HRR99_10365 | Q8UDE9 | Positive | 2089842 - 2093327 | 126032.0 |
| srpbcc domain-containing protein | HRR99_10370 | Not Available | Positive | 2093428 - 2093874 | 17183.4 |
| udgx family uracil-dna binding protein | HRR99_10375 | Q9WYY1 | Negative | 2093866 - 2095350 | 55914.2 |
| putative dna modification/repair radical sam protein | HRR99_10380 | Not Available | Negative | 2095350 - 2096582 | 45739.1 |
| transcription elongation factor grea | HRR99_10385 | Q8UDE5 | Positive | 2096803 - 2097279 | 17408.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

