Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | HRR99_10190 | Q8GAK7 | Negative | 2047773 - 2049161 | 50315.2 |
| glutamine synthetase | HRR99_10195 | O88070 | Negative | 2049182 - 2050552 | 51292.6 |
| amino acid permease | HRR99_10200 | O87394 | Negative | 2050611 - 2052125 | 54058.9 |
| n-formylglutamate amidohydrolase | HRR99_10205 | Not Available | Negative | 2052319 - 2053092 | 28367.7 |
| murr/rpir family transcriptional regulator | HRR99_10210 | P46118 | Positive | 2053270 - 2054154 | 32850.9 |
| abc transporter substrate-binding protein | HRR99_10215 | P55454 | Positive | 2054364 - 2055470 | 39066.5 |
| abc transporter permease subunit | HRR99_10220 | P45170 | Positive | 2055581 - 2056471 | 31965.2 |
| abc transporter permease | HRR99_10225 | D4GQ17 | Positive | 2056468 - 2057250 | 28536.8 |
| abc transporter atp-binding protein | HRR99_10230 | Q1GIE5 | Positive | 2057262 - 2058320 | 38117.0 |
| zinc-dependent alcohol dehydrogenase family protein | HRR99_10235 | P42328 | Positive | 2058379 - 2059422 | 37439.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

