Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | HRR99_10140 | P0DP90 | Positive | 2036742 - 2038394 | 60117.0 |
| hugz family protein | HRR99_10145 | Not Available | Positive | 2038536 - 2039300 | 27230.6 |
| rida family protein | HRR99_10150 | P71394 | Negative | 2039623 - 2039964 | 12013.3 |
| tigr01244 family phosphatase | HRR99_10155 | Q8UAA9 | Negative | 2040011 - 2040349 | 12211.4 |
| duf4432 family protein | HRR99_10160 | Not Available | Negative | 2040475 - 2041308 | 30380.7 |
| l,d-transpeptidase | HRR99_10165 | Q5WC42 | Positive | 2041497 - 2042882 | 49980.7 |
| mfs transporter | HRR99_10170 | P96675 | Negative | 2043107 - 2044336 | 42932.9 |
| tetr/acrr family transcriptional regulator | HRR99_10175 | P75952 | Negative | 2044386 - 2045006 | 22095.6 |
| para family protein | HRR99_10180 | P07175 | Negative | 2045089 - 2045802 | 25695.5 |
| iron-containing alcohol dehydrogenase | HRR99_10185 | Q59104 | Negative | 2046631 - 2047776 | 40609.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

