Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | HRR99_09990 | B8H0A0 | Negative | 2004408 - 2006147 | 63039.9 |
| hypothetical protein | HRR99_09995 | Not Available | Negative | 2006147 - 2006704 | 19606.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | HRR99_10000 | P58745 | Negative | 2006706 - 2007731 | 36166.6 |
| division/cell wall cluster transcriptional repressor mraz | HRR99_10005 | P58768 | Negative | 2007746 - 2008186 | 16142.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2008585 - 2008986 | Not Available |
| fad-dependent oxidoreductase | HRR99_10015 | P23342 | Negative | 2009046 - 2010239 | 42729.7 |
| fad-dependent oxidoreductase | HRR99_10020 | P40859 | Negative | 2010537 - 2011724 | 42344.1 |
| lytic transglycosylase domain-containing protein | HRR99_10025 | O64046 | Negative | 2011846 - 2012382 | 19446.8 |
| n-acetylmuramoyl-l-alanine amidase | HRR99_10030 | P75820 | Negative | 2012628 - 2013395 | 27879.8 |
| dnaj family molecular chaperone | HRR99_10035 | Q74Q30 | Negative | 2013392 - 2014132 | 27520.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

