Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HRR99_00355 | P55469 | Negative | 66378 - 68135 | 63704.5 |
| glucokinase | HRR99_00360 | Q8UIV7 | Negative | 68254 - 69276 | 36333.8 |
| methylglyoxal synthase | HRR99_00365 | Q8UIV6 | Negative | 69301 - 69684 | 13731.5 |
| penicillin-insensitive murein endopeptidase | HRR99_00370 | P44566 | Negative | 69781 - 70839 | 38066.7 |
| abc transporter substrate-binding protein | HRR99_00375 | P55691 | Positive | 71023 - 72867 | 68612.0 |
| microcin c abc transporter permease yejb | HRR99_00380 | P0AFU1 | Positive | 73013 - 74101 | 40045.2 |
| abc transporter permease | HRR99_00385 | P33915 | Positive | 74107 - 75243 | 42005.3 |
| abc transporter atp-binding protein | HRR99_00390 | P33916 | Positive | 75240 - 76889 | 60309.5 |
| glutamine synthetase | HRR99_00395 | P78061 | Positive | 77065 - 78426 | 49998.3 |
| fad-binding oxidoreductase | HRR99_00400 | P37906 | Positive | 78428 - 79729 | 46648.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

