Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRR99_00255 | Not Available | Negative | 49583 - 50197 | 22204.6 |
| succinyl-diaminopimelate desuccinylase | HRR99_00260 | A9CKC4 | Negative | 50184 - 51377 | 42433.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HRR99_00265 | Q8UIC6 | Negative | 51392 - 52246 | 30374.3 |
| log family protein | HRR99_00270 | Q8L8B8 | Positive | 52385 - 53245 | 31964.5 |
| nucleoside hydrolase | HRR99_00275 | Q9P6J4 | Negative | 53391 - 54335 | 34284.6 |
| hsp20 family protein | HRR99_00280 | A8G7R8 | Positive | 54516 - 54941 | 15888.0 |
| duf1150 family protein | HRR99_00285 | Not Available | Positive | 55001 - 55258 | 9423.29 |
| trimeric intracellular cation channel family protein | HRR99_00290 | Q9KPI5 | Negative | 55316 - 55951 | 21900.3 |
| hypothetical protein | HRR99_00295 | Not Available | Positive | 56090 - 56563 | 17961.6 |
| duf1275 domain-containing protein | HRR99_00300 | O31185 | Negative | 56575 - 57282 | 25123.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

