Agrobacterium vaccinii B7.6

Gram-negativeRodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium vaccinii B7.6 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses flagella, which facilitate motility. Notably, A. vaccinii B7.6 has a unique genomic structure consisting of three replicons. This feature may contribute to its adaptability and versatility in various environments. The organism is identified by specific accessions in genomic databases, which include CP054150.1, CP054151.1, and CP054152.1. These accessions provide valuable resources for researchers interested in the genetic and functional characteristics of A. vaccinii B7.6. The presence of flagella suggests that A. vaccinii B7.6 can actively move towards favorable conditions, which may enhance its survival and colonization in diverse ecological niches. Given its classification within the Agrobacterium genus, this bacterium may also play a role in plant interactions, potentially influencing agricultural practices or plant health. In sum, the characteristics of Agrobacterium vaccinii B7.6, including its Gram-negative status, rod shape, flagella, and unique genomic structure, highlight its potential ecological significance and adaptability. Understanding these traits may provide insights into its role in environmental microbiology and its interactions within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium vaccinii
StrainB7.6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium vaccinii B7.6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatanaerobic digester
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium vaccinii B7.6, Complete Genome

Gene Summary

Adenine Count

669124 bp

Thymine Count

655679 bp

Guanine Count

899920 bp

Cytosine Count

911901 bp

Genome Length

3136624 bp

Protein-coding Genes

2906 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2865 domain-containing proteinHRR99_08140Not AvailablePositive1627592 - 162875241720.6
5,6-dimethylbenzimidazole synthaseHRR99_08145Q92PC8Negative1628768 - 162945425727.6
hypothetical proteinHRR99_08150Not AvailablePositive1629802 - 16299907193.36
phospholipase d family proteinHRR99_08155P75919Positive1630065 - 163159156667.9
carboxymuconolactone decarboxylase family proteinHRR99_08160Not AvailablePositive1631668 - 163227322058.2
response regulatorHRR99_08165Q4GZK6Negative1632270 - 163310631447.8
response regulatorHRR99_08170Q48IV1Negative1633242 - 163361913762.5
sdr family oxidoreductaseHRR99_08175P73574Negative1633785 - 163448924763.6
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeHRR99_08180P96847Negative1634596 - 163575341609.7
dsba family proteinHRR99_08185Q9S2C8Positive1635924 - 163669127812.2

Displaying genes 1631 – 1640 of 4620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.