Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifu family protein | HRR99_00155 | B4IMF6 | Positive | 31806 - 32369 | 20167.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | HRR99_00160 | Q87RD1 | Positive | 32388 - 33056 | 22411.8 |
| gnat family n-acetyltransferase | HRR99_00165 | P0A946 | Positive | 33097 - 33591 | 18163.8 |
| transcriptional repressor | HRR99_00170 | O07315 | Positive | 33655 - 34083 | 16712.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | HRR99_00175 | Q7APG1 | Positive | 34113 - 34913 | 29088.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | HRR99_00180 | Q7D1M2 | Positive | 34964 - 36361 | 51746.3 |
| phoh family protein | HRR99_00185 | P46343 | Positive | 36408 - 37463 | 38387.6 |
| rrna maturation rnase ybey | HRR99_00190 | Q8UID9 | Positive | 37473 - 37979 | 18894.2 |
| hlyc/corc family transporter | HRR99_00195 | Q4UK99 | Positive | 37997 - 39136 | 41942.6 |
| apolipoprotein n-acyltransferase | HRR99_00200 | Q8UID7 | Positive | 39329 - 40918 | 56927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

