Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | HRR99_00055 | O34973 | Negative | 8319 - 9443 | 40968.1 |
| pts iia-like nitrogen regulatory protein ptsn | HRR99_00060 | P30335 | Negative | 9468 - 9929 | 16487.0 |
| ribosome-associated translation inhibitor raia | HRR99_00065 | P17265 | Negative | 10009 - 10584 | 21105.9 |
| rna polymerase factor sigma-54 | HRR99_00070 | P49989 | Negative | 10809 - 12356 | 57083.9 |
| lps export abc transporter atp-binding protein | HRR99_00075 | P25885 | Negative | 12540 - 13337 | 28997.0 |
| hypothetical protein | HRR99_00080 | P25893 | Negative | 13363 - 13941 | 20344.3 |
| lps export abc transporter periplasmic protein lptc | HRR99_00085 | Not Available | Negative | 13955 - 14620 | 23523.4 |
| signal peptide peptidase sppa | HRR99_00090 | O34525 | Positive | 14861 - 15814 | 34921.4 |
| integration host factor subunit beta | HRR99_00095 | Q8UIF9 | Positive | 15841 - 16146 | 11405.4 |
| duf1049 domain-containing protein | HRR99_00100 | Not Available | Positive | 16271 - 16621 | 12844.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

