Agrobacterium vaccinii B7.6

Gram-negativeRodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium vaccinii B7.6 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses flagella, which facilitate motility. Notably, A. vaccinii B7.6 has a unique genomic structure consisting of three replicons. This feature may contribute to its adaptability and versatility in various environments. The organism is identified by specific accessions in genomic databases, which include CP054150.1, CP054151.1, and CP054152.1. These accessions provide valuable resources for researchers interested in the genetic and functional characteristics of A. vaccinii B7.6. The presence of flagella suggests that A. vaccinii B7.6 can actively move towards favorable conditions, which may enhance its survival and colonization in diverse ecological niches. Given its classification within the Agrobacterium genus, this bacterium may also play a role in plant interactions, potentially influencing agricultural practices or plant health. In sum, the characteristics of Agrobacterium vaccinii B7.6, including its Gram-negative status, rod shape, flagella, and unique genomic structure, highlight its potential ecological significance and adaptability. Understanding these traits may provide insights into its role in environmental microbiology and its interactions within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium vaccinii
StrainB7.6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium vaccinii B7.6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatanaerobic digester
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium vaccinii B7.6, Complete Genome

Gene Summary

Adenine Count

669124 bp

Thymine Count

655679 bp

Guanine Count

899920 bp

Cytosine Count

911901 bp

Genome Length

3136624 bp

Protein-coding Genes

2906 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter permease lptfHRR99_04965Q9ZC95Negative981931 - 98310042659.2
hypothetical proteinHRR99_04970Not AvailableNegative983179 - 9833857803.51
leucyl aminopeptidaseHRR99_04975Q8UGC8Positive983375 - 98486552362.1
dna polymerase iii subunit chiHRR99_04980Q9ZC94Positive984898 - 98534716810.6
sensor domain-containing diguanylate cyclaseHRR99_04985Q9I310Positive985381 - 98640937404.7
gfo/idh/moca family oxidoreductaseHRR99_04990Q53TZ2Negative986431 - 98735733629.9
polysaccharide deacetylase family proteinHRR99_04995A0A0H3GDH9Negative987673 - 98850929835.3
abc-f family atp-binding cassette domain-containing proteinHRR99_05000P63390Negative988702 - 99058568448.0
ggdef domain-containing proteinHRR99_05005P75908Negative990650 - 99160634616.1
glutathione s-transferase family proteinHRR99_05010P27457Positive991913 - 99260525823.7

Displaying genes 1031 – 1040 of 4620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.