Sphaerochaeta coccoides SPN1

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Sphaerochaetaceae

Genus

Parasphaerochaeta

Description

Sphaerochaeta coccoides SPN1 is characterized by having a single replicon, which is significant for its genomic structure and replication processes. The organism is documented under the accession number CP002659.1, indicating its presence in genomic databases and allowing for further research and studies related to its genetic features. As a member of the Sphaerochaeta genus, S. coccoides SPN1 may play a role in specific ecological niches, particularly in environments where its unique metabolic capabilities could be advantageous. While the specific ecological roles and interactions of S. coccoides SPN1 are not detailed in the provided traits, the traits suggest a focus on its genomic organization. The existence of a single replicon can imply a streamlined genetic regulation, potentially affecting its adaptability and survival strategies in varying environmental conditions. This trait could also influence its evolutionary dynamics when compared to microorganisms with multiple replicons, which may exhibit different genetic exchange and stability profiles. In summary, Sphaerochaeta coccoides SPN1, with its single replicon and documented genomic information, offers an intriguing opportunity for further exploration into its biology and potential ecological roles in its habitat. Understanding its genomic characteristics may shed light on its adaptive mechanisms and ecological significance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySphaerochaetaceae
GenusParasphaerochaeta
SpeciesParasphaerochaeta coccoides
StrainSPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphaerochaeta coccoides SPN1, Complete Genome

Gene Summary

Adenine Count

554114 bp

Thymine Count

547105 bp

Guanine Count

553298 bp

Cytosine Count

572779 bp

Genome Length

2227296 bp

Protein-coding Genes

1822 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein family upf0029, impact, n-terminal proteinSpico_0031P27862Negative33645 - 3425921798.3
nudix hydrolaseSpico_0032Q7ZWC3Negative34272 - 3527638172.6
hypothetical proteinSpico_0033Not AvailablePositive35488 - 3648037703.5
tubulin/ftsz gtpaseSpico_0034Q9K9T7Positive36499 - 3723025697.8
hypothetical proteinSpico_0035Not AvailablePositive37265 - 3759411582.7
deoxyribose-phosphate aldolaseSpico_0036C5D4T6Positive37744 - 3841522984.6
thymidine kinaseSpico_0037B5Y8S5Positive38402 - 3955643857.4
xylose isomerase domain-containing protein tim barrelSpico_0038Not AvailableNegative39654 - 4053532784.0
polygalacturonaseSpico_0039A7PZL3Positive40581 - 4196049138.5
hypothetical proteinSpico_0040Not AvailablePositive41957 - 421757831.62

Displaying genes 31 – 40 of 1881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.