Sphaerochaeta coccoides SPN1

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Sphaerochaetaceae

Genus

Parasphaerochaeta

Description

Sphaerochaeta coccoides SPN1 is characterized by having a single replicon, which is significant for its genomic structure and replication processes. The organism is documented under the accession number CP002659.1, indicating its presence in genomic databases and allowing for further research and studies related to its genetic features. As a member of the Sphaerochaeta genus, S. coccoides SPN1 may play a role in specific ecological niches, particularly in environments where its unique metabolic capabilities could be advantageous. While the specific ecological roles and interactions of S. coccoides SPN1 are not detailed in the provided traits, the traits suggest a focus on its genomic organization. The existence of a single replicon can imply a streamlined genetic regulation, potentially affecting its adaptability and survival strategies in varying environmental conditions. This trait could also influence its evolutionary dynamics when compared to microorganisms with multiple replicons, which may exhibit different genetic exchange and stability profiles. In summary, Sphaerochaeta coccoides SPN1, with its single replicon and documented genomic information, offers an intriguing opportunity for further exploration into its biology and potential ecological roles in its habitat. Understanding its genomic characteristics may shed light on its adaptive mechanisms and ecological significance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySphaerochaetaceae
GenusParasphaerochaeta
SpeciesParasphaerochaeta coccoides
StrainSPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphaerochaeta coccoides SPN1, Complete Genome

Gene Summary

Adenine Count

554114 bp

Thymine Count

547105 bp

Guanine Count

553298 bp

Cytosine Count

572779 bp

Genome Length

2227296 bp

Protein-coding Genes

1822 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfide dehydrogenase (flavoprotein) subunit sudaSpico_1117Q8U195Negative1285162 - 128664953506.7
sulfide dehydrogenase (flavoprotein) subunit sudbSpico_1118Q8U194Negative1286671 - 128750430032.1
heat shock protein hsp20Spico_1119Q4UKR8Negative1287873 - 128831916933.0
transcriptional regulator, arac familySpico_1120P0A9E1Negative1288647 - 128945029900.8
transport system permease proteinSpico_1121P94418Positive1289655 - 129062334240.4
transport system permease proteinSpico_1122P94419Positive1290610 - 129157234626.9
iron-chelate-transporting atpaseSpico_1123P94420Positive1291569 - 129232727579.2
periplasmic binding proteinSpico_1124P94421Positive1292377 - 129333933342.2
crispr-associated helicase cas3Spico_1125Q53VY2Positive1293817 - 129643598168.5
crispr-associated protein, cse1 familySpico_1126Not AvailablePositive1296429 - 129793756807.5

Displaying genes 1141 – 1150 of 1881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.