Spirosoma rhododendri CJU-R4

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma rhododendri CJU-R4 is a bacterial species characterized by the presence of flagella, which are structures that facilitate motility. This trait indicates that S. rhododendri CJU-R4 is likely capable of active movement in its environment, which could play a role in its ecological interactions and adaptation to various habitats. The genomic analysis of S. rhododendri CJU-R4 reveals the presence of three replicons, suggesting a complex genomic architecture. Such a configuration may offer advantages in terms of genetic diversity and adaptability, allowing the organism to thrive under different environmental conditions. The organism is documented with three specific accessions: CP051677.1, CP051678.1, and CP051679.1. These accessions represent distinct genomic segments or contigs that contribute to our understanding of the genetic makeup of S. rhododendri CJU-R4. The traits of flagella presence and multiple replicons indicate that S. rhododendri CJU-R4 is likely well-adapted to its ecological niche, allowing it to navigate its environment effectively while maintaining genetic flexibility. This adaptability may be critical for survival in fluctuating conditions, underscoring the importance of motility and genetic diversity in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma rhododendri
StrainCJU-R4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirosoma rhododendri CJU-R4, Complete Genome

Gene Summary

Adenine Count

1286359 bp

Thymine Count

1281358 bp

Guanine Count

1596675 bp

Cytosine Count

1597361 bp

Genome Length

5761753 bp

Protein-coding Genes

4800 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family intramembrane serine proteaseHH216_04510O14364Negative1145820 - 114660529491.9
dna mismatch repair endonuclease mutlHH216_04515Q11Z58Negative1146638 - 114868075309.9
dihydrolipoyl dehydrogenaseHH216_04520O05940Negative1148873 - 115027349811.1
pin domain-containing proteinHH216_04525Q58384Negative1150377 - 115081716281.7
hypothetical proteinHH216_04530Not AvailableNegative1150807 - 11510409069.78
peptide chain release factor 2HH216_04535Q47WT4Positive1151241 - 115232140686.5
l-2-hydroxyglutarate oxidaseHH216_04540S2DJ52Negative1152491 - 115369043827.8
anthranilate phosphoribosyltransferaseHH216_04545O66585Negative1153754 - 115501046210.6
uroporphyrinogen-iii c-methyltransferaseHH216_04550Q58375Negative1155072 - 115587228322.2
nitrite reductase large subunitHH216_04555Q06458Positive1156113 - 115862991273.7

Displaying genes 901 – 910 of 5090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.