Spirosoma rhododendri CJU-R4

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma rhododendri CJU-R4 is a bacterial species characterized by the presence of flagella, which are structures that facilitate motility. This trait indicates that S. rhododendri CJU-R4 is likely capable of active movement in its environment, which could play a role in its ecological interactions and adaptation to various habitats. The genomic analysis of S. rhododendri CJU-R4 reveals the presence of three replicons, suggesting a complex genomic architecture. Such a configuration may offer advantages in terms of genetic diversity and adaptability, allowing the organism to thrive under different environmental conditions. The organism is documented with three specific accessions: CP051677.1, CP051678.1, and CP051679.1. These accessions represent distinct genomic segments or contigs that contribute to our understanding of the genetic makeup of S. rhododendri CJU-R4. The traits of flagella presence and multiple replicons indicate that S. rhododendri CJU-R4 is likely well-adapted to its ecological niche, allowing it to navigate its environment effectively while maintaining genetic flexibility. This adaptability may be critical for survival in fluctuating conditions, underscoring the importance of motility and genetic diversity in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma rhododendri
StrainCJU-R4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirosoma rhododendri CJU-R4, Complete Genome

Gene Summary

Adenine Count

1286359 bp

Thymine Count

1281358 bp

Guanine Count

1596675 bp

Cytosine Count

1597361 bp

Genome Length

5761753 bp

Protein-coding Genes

4800 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-binding domain-containing proteinHH216_21510Q47719Negative5164212 - 516493425429.4
alpha-l-fucosidaseHH216_21515P17164Negative5165175 - 516683361968.9
helix-turn-helix transcriptional regulatorHH216_21520Q8NYT6Negative5167023 - 516794334564.1
sdr family nad(p)-dependent oxidoreductaseHH216_21525A6SSW9Negative5168125 - 516900031423.9
mfs transporterHH216_21530Q0K843Negative5169248 - 517052846947.9
dmt family transporterHH216_21535A0A0H2ZHZ4Negative5170525 - 517143033231.5
4-oxalomesaconate tautomeraseHH216_21540P0AAV9Negative5171417 - 517256841023.9
fad-dependent tricarballylate dehydrogenase tcuaHH216_21545B5XRB0Negative5172565 - 517410956077.7
tonb-dependent receptorHH216_21550T2KM18Negative5174373 - 5177333107269.0
fecr family proteinHH216_21555Not AvailableNegative5177530 - 517861840383.0

Displaying genes 4301 – 4310 of 5090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.