Spirosoma rhododendri CJU-R4

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma rhododendri CJU-R4 is a bacterial species characterized by the presence of flagella, which are structures that facilitate motility. This trait indicates that S. rhododendri CJU-R4 is likely capable of active movement in its environment, which could play a role in its ecological interactions and adaptation to various habitats. The genomic analysis of S. rhododendri CJU-R4 reveals the presence of three replicons, suggesting a complex genomic architecture. Such a configuration may offer advantages in terms of genetic diversity and adaptability, allowing the organism to thrive under different environmental conditions. The organism is documented with three specific accessions: CP051677.1, CP051678.1, and CP051679.1. These accessions represent distinct genomic segments or contigs that contribute to our understanding of the genetic makeup of S. rhododendri CJU-R4. The traits of flagella presence and multiple replicons indicate that S. rhododendri CJU-R4 is likely well-adapted to its ecological niche, allowing it to navigate its environment effectively while maintaining genetic flexibility. This adaptability may be critical for survival in fluctuating conditions, underscoring the importance of motility and genetic diversity in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma rhododendri
StrainCJU-R4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirosoma rhododendri CJU-R4, Complete Genome

Gene Summary

Adenine Count

1286359 bp

Thymine Count

1281358 bp

Guanine Count

1596675 bp

Cytosine Count

1597361 bp

Genome Length

5761753 bp

Protein-coding Genes

4800 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytanoyl-coa dioxygenase family proteinHH216_20410Not AvailableNegative4905356 - 490634238036.7
helix-turn-helix transcriptional regulatorHH216_20415Q1C0W2Positive4906471 - 490733433123.4
susd/ragb family nutrient-binding outer membrane lipoproteinHH216_20420Not AvailableNegative4907405 - 490893755845.8
susc/raga family tonb-linked outer membrane proteinHH216_20425T2KPJ3Negative4908960 - 4912121113721.0
duf4974 domain-containing proteinHH216_20430Not AvailableNegative4912504 - 491350836795.0
sigma-70 family rna polymerase sigma factorHH216_20435Not AvailableNegative4913558 - 491411521733.9
putative porinHH216_20440Not AvailableNegative4914214 - 491618775245.7
tetraacyldisaccharide 4'-kinaseHH216_20445Q11U43Negative4916294 - 491743342099.6
o-succinylbenzoate synthaseHH216_20450Q6ARP5Positive4917487 - 491858141483.8
oxygen-dependent coproporphyrinogen oxidaseHH216_20455Q8DL15Negative4918688 - 491959934357.1

Displaying genes 4081 – 4090 of 5090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.