Spirosoma rhododendri CJU-R4

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Spirosoma

Description

Spirosoma rhododendri CJU-R4 is a bacterial species characterized by the presence of flagella, which are structures that facilitate motility. This trait indicates that S. rhododendri CJU-R4 is likely capable of active movement in its environment, which could play a role in its ecological interactions and adaptation to various habitats. The genomic analysis of S. rhododendri CJU-R4 reveals the presence of three replicons, suggesting a complex genomic architecture. Such a configuration may offer advantages in terms of genetic diversity and adaptability, allowing the organism to thrive under different environmental conditions. The organism is documented with three specific accessions: CP051677.1, CP051678.1, and CP051679.1. These accessions represent distinct genomic segments or contigs that contribute to our understanding of the genetic makeup of S. rhododendri CJU-R4. The traits of flagella presence and multiple replicons indicate that S. rhododendri CJU-R4 is likely well-adapted to its ecological niche, allowing it to navigate its environment effectively while maintaining genetic flexibility. This adaptability may be critical for survival in fluctuating conditions, underscoring the importance of motility and genetic diversity in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusSpirosoma
SpeciesSpirosoma rhododendri
StrainCJU-R4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirosoma rhododendri CJU-R4, Complete Genome

Gene Summary

Adenine Count

1286359 bp

Thymine Count

1281358 bp

Guanine Count

1596675 bp

Cytosine Count

1597361 bp

Genome Length

5761753 bp

Protein-coding Genes

4800 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl hydrolaseHH216_15960Q5H7P5Positive3837766 - 384040298993.6
sigma-70 family rna polymerase sigma factorHH216_15965A0R2D4Positive3840840 - 384142122703.5
duf4974 domain-containing proteinHH216_15970Not AvailablePositive3841470 - 384257641168.7
susc/raga family tonb-linked outer membrane proteinHH216_15975T2KPJ3Positive3842670 - 3845978120138.0
ragb/susd family nutrient uptake outer membrane proteinHH216_15980Q8A1G2Positive3845995 - 384772265101.1
response regulator transcription factorHH216_15985Q47456Positive3848061 - 384873225610.9
hamp domain-containing proteinHH216_15990Q2FH24Positive3848745 - 385010650868.1
sumf1/egtb/pvdo family nonheme iron enzymeHH216_15995Not AvailablePositive3850446 - 38505534031.94
sterol desaturase family proteinHH216_16000A0A0E0SNE8Positive3850778 - 385161132238.8
hypothetical proteinHH216_16005Not AvailablePositive3851843 - 385224414899.2

Displaying genes 3191 – 3200 of 5090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.