Duganella dendranthematis AF9R3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella dendranthematis AF9R3 is a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number CP051684.1, providing a reference for genomic and taxonomic studies. As a member of the Duganella genus, this bacterium is likely to inhabit diverse environments, particularly those associated with plants. The genus is known for its role in plant-microbe interactions, which can influence both plant health and soil ecology. Given the traits of Duganella dendranthematis AF9R3, it may contribute to nutrient cycling or plant growth promotion, although specific ecological roles are not detailed in the provided information. The unique characteristics of Duganella dendranthematis AF9R3, particularly its Gram-negative status and rod shape, suggest that it may have specific adaptations to its environmental niche, potentially affecting its interactions with other microorganisms and plants. Understanding such traits can offer insights into the ecological dynamics within the habitats it occupies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella dendranthematis
StrainAF9R3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella dendranthematis AF9R3, Complete Genome

Gene Summary

Adenine Count

1225001 bp

Thymine Count

1219714 bp

Guanine Count

2046757 bp

Cytosine Count

2041310 bp

Genome Length

6532782 bp

Protein-coding Genes

5828 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3'-5' exonuclease domain-containing protein 2HH213_21060O93530Negative4587998 - 458864523402.5
activator of osmoprotectant transporter propHH213_21065A4SMD7Negative4588671 - 458915017529.2
rna polymerase sigma factor rpodHH213_21070P52326Positive4589558 - 459202989822.8
cpbp family intramembrane metalloproteaseHH213_21075Not AvailablePositive4592119 - 459319538875.0
hypothetical proteinHH213_21080Not AvailablePositive4593221 - 459369716978.7
gfa family proteinHH213_21085E1VBT6Positive4593705 - 459410014124.6
hypothetical proteinHH213_21090Not AvailableNegative4594049 - 459448015847.2
phosphoenolpyruvate carboxylaseHH213_21095A4JGV5Negative4594595 - 4597429104633.0
hydroxymethylbilane synthaseHH213_21100B2JEN9Positive4597596 - 459860935829.3
uroporphyrinogen iii synthaseHH213_21105P48246Positive4598617 - 459940827825.8

Displaying genes 4211 – 4220 of 5957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.