Duganella dendranthematis AF9R3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella dendranthematis AF9R3 is a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number CP051684.1, providing a reference for genomic and taxonomic studies. As a member of the Duganella genus, this bacterium is likely to inhabit diverse environments, particularly those associated with plants. The genus is known for its role in plant-microbe interactions, which can influence both plant health and soil ecology. Given the traits of Duganella dendranthematis AF9R3, it may contribute to nutrient cycling or plant growth promotion, although specific ecological roles are not detailed in the provided information. The unique characteristics of Duganella dendranthematis AF9R3, particularly its Gram-negative status and rod shape, suggest that it may have specific adaptations to its environmental niche, potentially affecting its interactions with other microorganisms and plants. Understanding such traits can offer insights into the ecological dynamics within the habitats it occupies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella dendranthematis
StrainAF9R3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella dendranthematis AF9R3, Complete Genome

Gene Summary

Adenine Count

1225001 bp

Thymine Count

1219714 bp

Guanine Count

2046757 bp

Cytosine Count

2041310 bp

Genome Length

6532782 bp

Protein-coding Genes

5828 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseHH213_19565Q8ZFQ3Negative4278755 - 427931520454.9
nadp-dependent isocitrate dehydrogenaseHH213_19570Q02NB5Positive4279439 - 428069545634.1
dtdp-4-dehydrorhamnose reductaseHH213_19575Q2SYI1Negative4280732 - 428158931151.1
dtdp-4-dehydrorhamnose 3,5-epimeraseHH213_19580Q9HU21Negative4281586 - 428213420135.8
glucose-1-phosphate thymidylyltransferase rfbaHH213_19585P37779Negative4282131 - 428303333124.6
dtdp-glucose 4,6-dehydrataseHH213_19590P26391Negative4283030 - 428410039788.6
cold-shock proteinHH213_19595P72366Negative4284327 - 42845307226.47
aec family transporterHH213_19600A4G7T9Positive4284856 - 428515711473.9
atp-dependent clp protease atp-binding subunit clpaHH213_19605P0ABI1Positive4285154 - 428746084309.3
pdz domain-containing proteinHH213_19610Q9RDE2Positive4287588 - 4290914120980.0

Displaying genes 3911 – 3920 of 5957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.