Marinomonas profundi M1K-6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas profundi M1K-6 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genome of this bacterium is documented under the accession number CP073013.1. This trait of possessing a single replicon can indicate a stable genetic structure, potentially enhancing its adaptability in various environments. Marinomonas profundi belongs to a genus known for its marine microbial diversity. The ecological role of members of the Marinomonas genus often includes participation in nutrient cycling in marine ecosystems. They are typically found in deep-sea environments, where they may contribute to the degradation of organic materials and the recycling of nutrients, thus playing a crucial role in the functioning of these ecosystems. The presence of a single replicon in Marinomonas profundi M1K-6 could provide insights into its evolutionary adaptations to deep-sea environments, where efficiency in resource utilization is critical. This characteristic may also reflect its ability to thrive in stable ecological niches, where rapid genomic changes are not as advantageous. Overall, the genomic traits of Marinomonas profundi M1K-6 underscore its potential significance in marine microbiology and its role in maintaining ecological balance in deep-sea habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas profundi
StrainM1K-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas profundi M1K-6, Complete Genome

Gene Summary

Adenine Count

983687 bp

Thymine Count

983564 bp

Guanine Count

836273 bp

Cytosine Count

844535 bp

Genome Length

3648059 bp

Protein-coding Genes

3255 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyldiaminopimelate transaminaseJ8N69_01920C6BUK3Positive427787 - 42897444284.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseJ8N69_01925Q88MP1Positive429020 - 43005736468.7
arsc family reductaseJ8N69_01930P24178Positive430123 - 43048213981.8
hypothetical proteinJ8N69_01935Not AvailableNegative430479 - 4306857274.02
succinyl-diaminopimelate desuccinylaseJ8N69_01940A6VUR6Positive430765 - 43191041347.1
hypothetical proteinJ8N69_01945Not AvailablePositive431921 - 4321879791.88
hypothetical proteinJ8N69_01950Not AvailablePositive432192 - 43257214475.7
aspartate 1-decarboxylaseJ8N69_01955A6VUR3Positive432632 - 43301214031.7
thiol peroxidaseJ8N69_01960Q8KED5Negative433456 - 43395317090.1
cold-shock proteinJ8N69_01965P0A356Negative433979 - 4342279429.83

Displaying genes 441 – 450 of 3401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.