Pseudomonas tohonis TUM18999

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas tohonis TUM18999 is characterized by having a single replicon, indicating a streamlined genomic structure. This organism is cataloged under the accession number AP023189.1, which provides a unique identifier for its genomic data, allowing for further exploration and study of its genetic makeup. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which can include soil, water, and even plant and animal hosts. The presence of a single replicon suggests that P. tohonis TUM18999 may possess efficient replication and regulation mechanisms, potentially enhancing its survival in diverse ecological niches. Understanding the traits of Pseudomonas tohonis TUM18999 contributes to broader insights into the ecological roles of Pseudomonas species, particularly in nutrient cycling and bioremediation processes. These bacteria are often involved in the breakdown of organic materials and can play a significant role in maintaining ecosystem health. The unique genomic features of P. tohonis TUM18999 may provide further avenues for research into its specific ecological interactions and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas tohonis
StrainTUM18999

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas tohonis TUM18999
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas tohonis TUM18999, Complete Genome

Gene Summary

Adenine Count

1144292 bp

Thymine Count

1152195 bp

Guanine Count

2259864 bp

Cytosine Count

2269711 bp

Genome Length

6826062 bp

Protein-coding Genes

6055 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
high-affinity branched-chain amino acid transport atp-binding protein brafTUM18999_15050P21629Negative1631840 - 163260728191.3
branched-chain amino acid abc transporter permeaseTUM18999_15060P21628Negative1632607 - 163386645806.9
high-affinity branched-chain amino acid transport system permease protein bradTUM18999_15070P21627Negative1633863 - 163478632637.0
leucine-, isoleucine-, valine-, threonine-, and alanine-binding proteinTUM18999_15080P21175Negative1634902 - 163602339304.8
hypothetical proteinTUM18999_15090Not AvailablePositive1636284 - 163664313029.6
duf5064 domain-containing proteinTUM18999_15100Not AvailablePositive1636649 - 163708915572.3
3-hydroxyisobutyrate dehydrogenaseTUM18999_15110P0ABQ3Positive1637224 - 163810831094.0
hydroxypyruvate isomeraseTUM18999_15120Q0KBD1Positive1638105 - 163888427588.3
mfs transporterTUM18999_15130A0QYL8Positive1639084 - 164043348378.2
rna polymerase-associated protein rapaTUM18999_15140A4VNR4Negative1640575 - 1643424105844.0

Displaying genes 1691 – 1700 of 6257 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.