Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | HF324_24545 | Not Available | Positive | 12932 - 14389 | 55153.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | HF324_24550 | P51831 | Negative | 14505 - 15254 | 26778.4 |
| gh3 auxin-responsive promoter family protein | HF324_24555 | O22190 | Negative | 15272 - 16801 | 57890.1 |
| lps export abc transporter atp-binding protein | HF324_24560 | P33982 | Negative | 16825 - 17586 | 28243.3 |
| methylenetetrahydrofolate reductase | HF324_24565 | O67422 | Positive | 17758 - 18711 | 35790.4 |
| outer membrane beta-barrel protein | HF324_24570 | Not Available | Negative | 19155 - 19853 | 25066.0 |
| port family protein | HF324_24575 | Not Available | Negative | 20043 - 20669 | 21985.6 |
| port family protein | HF324_24580 | Not Available | Negative | 20824 - 21537 | 25423.0 |
| duf5106 domain-containing protein | HF324_24585 | Q8CXF3 | Negative | 21661 - 23067 | 53601.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | HF324_24590 | Q8AA22 | Positive | 23165 - 24586 | 53677.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
