Chitinophaga oryzae 1303

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga oryzae 1303 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure. The genetic information for Chitinophaga oryzae is cataloged under the accession number CP051204.2, which provides a reference for researchers studying its genomic traits and potential applications. As a member of the Chitinophagaceae family, Chitinophaga oryzae is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and the cell walls of fungi. This characteristic suggests a potential ecological role in nutrient cycling, particularly in environments where chitinous materials are prevalent. The ability to break down chitin can contribute to soil health and fertility by recycling organic matter. Overall, the traits of Chitinophaga oryzae 1303 highlight its significance in microbial ecology, especially regarding its potential to facilitate the decomposition of chitin-rich substrates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga oryzae
Strain1303

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga oryzae 1303, Complete Genome

Gene Summary

Adenine Count

2030387 bp

Thymine Count

2061454 bp

Guanine Count

2131913 bp

Cytosine Count

2140131 bp

Genome Length

8363885 bp

Protein-coding Genes

6559 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dehydrogenase e1 component subunit alpha/betaHF324_24895P37941Positive98940 - 10091372347.9
hypothetical proteinHF324_24900Not AvailablePositive100985 - 1011285326.74
redoxin domain-containing proteinHF324_24905P43221Negative101212 - 10258851338.0
o-acetyl-adp-ribose deacetylaseHF324_24910Q8EYT0Negative102681 - 10322319543.4
nyn domain-containing proteinHF324_24915Not AvailableNegative103228 - 10397727902.6
dna starvation/stationary phase protection proteinHF324_24920P0A3A8Negative104081 - 10455118405.9
mfs transporterHF324_24925P94577Positive104729 - 10591642626.2
dna recombination protein rmucHF324_24930Q9I4U3Negative105924 - 10737855290.1
iron-containing alcohol dehydrogenaseHF324_24935Q8EEB0Negative107495 - 10857140010.2
3-deoxy-manno-octulosonate cytidylyltransferaseHF324_24940A5FBA3Negative108592 - 10931727121.8

Displaying genes 91 – 100 of 2598 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.