Vagococcus hydrophili or JCM 33683, also known as KACC 21345, HDW17B

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Vagococcus

Description

Vagococcus hydrophili, also known by its designations JCM 33683, KACC 21345, and HDW17B, is a bacterial species characterized by the presence of flagella, indicating its motility. This trait allows V. hydrophili to navigate its aquatic environment effectively. The organism possesses a single replicon, suggesting a streamlined genomic structure, which may influence its evolutionary adaptations and metabolic capabilities. The genomic data for Vagococcus hydrophili is cataloged under the accession CP049887.1, providing a reference point for further genetic and functional studies. Understanding the genetic makeup of this species can offer insights into its ecological role and potential applications in biotechnology or environmental microbiology. From a biological and ecological perspective, the presence of flagella in Vagococcus hydrophili could facilitate its survival and interaction within aquatic ecosystems. Its motility may play a crucial role in nutrient acquisition, competition with other microorganisms, and its overall adaptability to various environmental conditions. These attributes underscore the importance of V. hydrophili in its habitat, potentially contributing to nutrient cycling and influencing microbial community dynamics in water bodies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusVagococcus
SpeciesVagococcus hydrophili
Strainor JCM 33683, also known as KACC 21345, HDW17B

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vagococcus hydrophili or JCM 33683, also known as KACC 21345, HDW17B, Complete Genome

Gene Summary

Adenine Count

992888 bp

Thymine Count

1006527 bp

Guanine Count

517742 bp

Cytosine Count

528626 bp

Genome Length

3045783 bp

Protein-coding Genes

2812 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prevent-host-death proteinG7082_10580Not AvailablePositive2158173 - 21584249514.43
type ii toxin-antitoxin system rele/pare family toxinG7082_10585Not AvailablePositive2158421 - 215873212473.1
asch domain-containing proteinG7082_10590Not AvailablePositive2158764 - 215915014741.7
ftsx-like permease family proteinG7082_10595O31712Negative2159244 - 216046444043.1
abc transporter atp-binding proteinG7082_10600O34979Negative2160457 - 216118827478.9
hlyd family efflux transporter periplasmic adaptor subunitG7082_10605Not AvailableNegative2161189 - 216235542397.4
hydroxymethylglutaryl-coa reductase, degradativeG7082_10610O28538Negative2162486 - 216375145497.4
hydroxymethylglutaryl-coa synthaseG7082_10615Q9FD71Negative2163764 - 216493643596.9
50s ribosomal protein l25/general stress protein ctcG7082_10620Q837L6Negative2165215 - 216583222301.5
m42 family metallopeptidaseG7082_10625O07603Negative2166186 - 216722038252.0

Displaying genes 2121 – 2130 of 2984 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.