Sphingomonas sinipercae HDW15C

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sinipercae HDW15C is a rod-shaped bacterium notable for its unique ecological and biological characteristics. This organism possesses a single flagellum, which facilitates motility, allowing it to navigate its environment effectively. The genomic information of Sphingomonas sinipercae HDW15C is encapsulated in one replicon, indicating a streamlined genomic structure. The specific accession number for its genetic sequence is CP049871.1, which can be referenced for further genomic analysis. The presence of a flagellum suggests that Sphingomonas sinipercae HDW15C may play a role in various ecological niches, potentially contributing to the degradation of organic materials or the cycling of nutrients in its habitat. Given the characteristics of the Sphingomonas genus, known for its ability to degrade complex compounds, S. sinipercae HDW15C could be involved in bioremediation processes or the breakdown of environmental pollutants. Understanding the traits of this bacterium not only enhances our knowledge of microbial diversity but also underscores the potential applications of Sphingomonas sinipercae HDW15C in environmental microbiology, particularly in efforts aimed at pollution mitigation and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sinipercae
StrainHDW15C

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sinipercae HDW15C
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sinipercae HDW15C, Complete Genome

Gene Summary

Adenine Count

357137 bp

Thymine Count

358310 bp

Guanine Count

677856 bp

Cytosine Count

677703 bp

Genome Length

2071006 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseG7078_10005A5VDC9Negative1933138 - 193420736982.8
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseG7078_10010P96613Negative1934207 - 193558347994.0
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseG7078_10015Q9RNM2Negative1935580 - 193700749997.7
penicillin-binding protein 2G7078_10020B8H0A0Negative1937015 - 193872461330.3
hypothetical proteinG7078_10025Not AvailableNegative1938721 - 193947326106.6
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhG7078_10030A5VDD4Negative1939470 - 194042934396.8
hypothetical proteinG7078_10035Q5LU80Negative1940426 - 194091718153.8
hypothetical proteinG7078_10040Not AvailablePositive1941329 - 194258243794.2
hypothetical proteinG7078_10045Not AvailableNegative1942574 - 194333526823.9
hypothetical proteinG7078_10050Not AvailableNegative1943332 - 19435718075.45

Displaying genes 2001 – 2010 of 2156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.