Sphingomonas piscis HDW15B

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas piscis HDW15B is a rod-shaped bacterium notable for its single replicon structure, which is characterized by having one circular DNA molecule. This feature is significant as it can influence the organism's replication and genetic stability. Additionally, Sphingomonas piscis HDW15B possesses flagella, which are important for motility, allowing the bacterium to navigate its environment effectively. The accession number for Sphingomonas piscis HDW15B is CP049869.1, which serves as a reference for researchers seeking to access its genomic data and further study its characteristics. The presence of flagella suggests that this bacterium may occupy diverse ecological niches where movement towards nutrients or away from harmful substances is crucial for survival. In summary, Sphingomonas piscis HDW15B, with its rod shape, single replicon, and motility enabled by flagella, represents an interesting subject for microbiological research. Understanding its ecological role can provide insights into the dynamics of microbial communities in aquatic environments, where such bacteria may play essential roles in nutrient cycling and interactions with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas piscis
StrainHDW15B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas piscis HDW15B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas piscis HDW15B, Complete Genome

Gene Summary

Adenine Count

500249 bp

Thymine Count

497942 bp

Guanine Count

856571 bp

Cytosine Count

863273 bp

Genome Length

2718035 bp

Protein-coding Genes

2714 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 3,4-dioxygenaseG7077_01510P22636Negative292676 - 29351831067.3
protocatechuate 4,5-dioxygenase subunit alphaG7077_01515P22635Negative293518 - 29392815617.4
amidohydrolaseG7077_01520G2IQQ5Negative293925 - 29495037963.4
nad(p)-dependent oxidoreductaseG7077_01525P21336Negative294947 - 29578328613.3
lysr family transcriptional regulatorG7077_01530Q88JX7Negative295849 - 29699140278.9
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylaseG7077_01535G2IQQ8Positive297094 - 29776823585.6
endopeptidase laG7077_01540Q0KJL4Positive297761 - 29881536694.0
amidohydrolase family proteinG7077_01545O87170Positive298812 - 29968732638.9
marr family transcriptional regulatorG7077_01550O33817Positive299741 - 30021416717.1
endopeptidase laG7077_01555A0A2P1BT06Negative300218 - 30230472252.8

Displaying genes 301 – 310 of 2768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.