Sphingomonas piscis HDW15B

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas piscis HDW15B is a rod-shaped bacterium notable for its single replicon structure, which is characterized by having one circular DNA molecule. This feature is significant as it can influence the organism's replication and genetic stability. Additionally, Sphingomonas piscis HDW15B possesses flagella, which are important for motility, allowing the bacterium to navigate its environment effectively. The accession number for Sphingomonas piscis HDW15B is CP049869.1, which serves as a reference for researchers seeking to access its genomic data and further study its characteristics. The presence of flagella suggests that this bacterium may occupy diverse ecological niches where movement towards nutrients or away from harmful substances is crucial for survival. In summary, Sphingomonas piscis HDW15B, with its rod shape, single replicon, and motility enabled by flagella, represents an interesting subject for microbiological research. Understanding its ecological role can provide insights into the dynamics of microbial communities in aquatic environments, where such bacteria may play essential roles in nutrient cycling and interactions with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas piscis
StrainHDW15B

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas piscis HDW15B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas piscis HDW15B, Complete Genome

Gene Summary

Adenine Count

500249 bp

Thymine Count

497942 bp

Guanine Count

856571 bp

Cytosine Count

863273 bp

Genome Length

2718035 bp

Protein-coding Genes

2714 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yran family proteinG7077_12065Q1GWI7Negative2366814 - 236716413451.4
16s rrna (cytidine(1402)-2'-o)-methyltransferaseG7077_12070Q2NAK3Negative2367161 - 236799729181.0
hypothetical proteinG7077_12075Not AvailablePositive2368085 - 236841711713.8
coproporphyrinogen iii oxidaseG7077_12080Q5SUV1Negative2368428 - 236960642674.4
rdgb/ham1 family non-canonical purine ntp pyrophosphataseG7077_12085Q2RN61Negative2369675 - 237032823546.4
ribonuclease phG7077_12090A5V3R9Negative2370283 - 237099925528.6
hypothetical proteinG7077_12095Not AvailablePositive2371074 - 237158918274.5
heat-inducible transcriptional repressor hrcaG7077_12100Q1GWJ6Positive2371621 - 237265236884.8
nucleotide exchange factor grpeG7077_12105A5V5Q2Positive2372649 - 237319720182.6
gamma-glutamyl-gamma-aminobutyrate hydrolase family proteinG7077_12110Q8X7G2Positive2373242 - 237400326604.5

Displaying genes 2411 – 2420 of 2768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.