Nocardioides piscis HDW12A

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides piscis HDW12A is a notable bacterium characterized by its single replicon. This trait indicates that it has a streamlined genomic structure, which can be advantageous for its replication and maintenance in various environments. The genomic data for Nocardioides piscis HDW12A can be accessed through the accession number CP049866.1, which provides a detailed insight into its genetic makeup. As a member of the Nocardioides genus, this bacterium is likely to exhibit characteristics typical of its relatives, including soil and aquatic habitats. Nocardioides species are known for their ability to degrade complex organic compounds, which suggests that Nocardioides piscis HDW12A may play a role in nutrient cycling within its ecosystem. This degradation capability can contribute to the breakdown of pollutants, thereby enhancing soil and water quality. The ecological relevance of Nocardioides piscis HDW12A is underscored by its potential applications in bioremediation processes, where microorganisms are employed to clean up contaminated environments. The presence of a single replicon could indicate a specialization that allows for efficient adaptation to specific ecological niches. Overall, understanding the genomic and ecological traits of Nocardioides piscis HDW12A can provide insights into its role in environmental microbiology and its applications in sustainable practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides piscis
StrainHDW12A

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides piscis HDW12A, Complete Genome

Gene Summary

Adenine Count

572182 bp

Thymine Count

572893 bp

Guanine Count

1322251 bp

Cytosine Count

1317342 bp

Genome Length

3784668 bp

Protein-coding Genes

3674 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinG7071_00910Not AvailableNegative166165 - 16683323760.7
phoh family proteinG7071_00915O07635Negative167116 - 16843547364.9
isoprenyl transferaseG7071_00920Q82IC1Negative168644 - 16957634223.8
hypothetical proteinG7071_00925Not AvailablePositive169458 - 16999719424.0
duf421 domain-containing proteinG7071_00930P96696Positive169997 - 17048517851.7
hemolysin iii family proteinG7071_00935P9WFN6Positive170538 - 17126026355.3
hypothetical proteinG7071_00940P65016Positive171333 - 17239738772.0
yihy/virulence factor brkb family proteinG7071_00945O34437Positive172446 - 17342334384.8
iron abc transporter permeaseG7071_00950Q81L64Negative173425 - 17547068249.7
iron-siderophore abc transporter substrate-binding proteinG7071_00955Q81L65Negative175498 - 17651735933.5

Displaying genes 181 – 190 of 270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.