Nocardioides piscis HDW12A

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides piscis HDW12A is a notable bacterium characterized by its single replicon. This trait indicates that it has a streamlined genomic structure, which can be advantageous for its replication and maintenance in various environments. The genomic data for Nocardioides piscis HDW12A can be accessed through the accession number CP049866.1, which provides a detailed insight into its genetic makeup. As a member of the Nocardioides genus, this bacterium is likely to exhibit characteristics typical of its relatives, including soil and aquatic habitats. Nocardioides species are known for their ability to degrade complex organic compounds, which suggests that Nocardioides piscis HDW12A may play a role in nutrient cycling within its ecosystem. This degradation capability can contribute to the breakdown of pollutants, thereby enhancing soil and water quality. The ecological relevance of Nocardioides piscis HDW12A is underscored by its potential applications in bioremediation processes, where microorganisms are employed to clean up contaminated environments. The presence of a single replicon could indicate a specialization that allows for efficient adaptation to specific ecological niches. Overall, understanding the genomic and ecological traits of Nocardioides piscis HDW12A can provide insights into its role in environmental microbiology and its applications in sustainable practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides piscis
StrainHDW12A

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides piscis HDW12A, Complete Genome

Gene Summary

Adenine Count

572182 bp

Thymine Count

572893 bp

Guanine Count

1322251 bp

Cytosine Count

1317342 bp

Genome Length

3784668 bp

Protein-coding Genes

3674 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinG7071_00460Not AvailablePositive83155 - 8453149347.4
calcium-binding proteinG7071_00465Not AvailableNegative84532 - 8585444167.7
hypothetical proteinG7071_00470Not AvailableNegative85972 - 8721943083.6
hypothetical proteinG7071_00475Not AvailableNegative87233 - 8787722242.3
helix-turn-helix domain-containing proteinG7071_00480P9WKT6Positive88034 - 882768818.39
pdz domain-containing proteinG7071_00485O53896Negative88282 - 8964345713.1
hypothetical proteinG7071_00490Not AvailableNegative89640 - 9020620060.1
rna polymerase sigma factor sigeG7071_00495A0R2D4Negative90203 - 9080822596.4
o-methyltransferaseG7071_00500A3Q3Q7Positive91000 - 9165023149.5
hypothetical proteinG7071_00505Not AvailableNegative91678 - 9201612208.3

Displaying genes 91 – 100 of 270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.