Leucobacter viscericola HDW9C

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leucobacter

Description

Leucobacter viscericola HDW9C is characterized by having a single replicon, which indicates a streamlined genomic structure. The genomic data for this bacterium is accessible under the accession number CP049863.1. This organism belongs to the genus Leucobacter, which is known for its presence in various environments, often associated with plant and soil ecosystems. The presence of only one replicon suggests that Leucobacter viscericola HDW9C may have evolved to maintain a compact genome, potentially enhancing its adaptability to specific niches. This trait could facilitate efficient replication and resource utilization, allowing the organism to thrive in competitive environments. In terms of its ecological role, members of the Leucobacter genus are typically involved in nutrient cycling and may contribute to soil health. The streamlined genomic architecture of Leucobacter viscericola HDW9C may play a crucial role in its ability to adapt to varying environmental conditions, thereby influencing microbial community dynamics and overall ecosystem functioning. Overall, the genomic characteristics of Leucobacter viscericola HDW9C highlight its potential importance in ecological contexts, particularly in its interactions within soil environments where it may help in nutrient processing and sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeucobacter
SpeciesLeucobacter viscericola
StrainHDW9C

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbrood pouch
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leucobacter viscericola HDW9C, Complete Genome

Gene Summary

Adenine Count

706370 bp

Thymine Count

716168 bp

Guanine Count

1137236 bp

Cytosine Count

1137359 bp

Genome Length

3697133 bp

Protein-coding Genes

3061 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxo-hepta-3-ene-1,7-dioate hydrataseG7068_04835P42270Positive1030491 - 103127628310.9
2-dehydro-3-deoxyglucarate aldolaseG7068_04840A8A876Positive1031261 - 103207928197.6
fumarylacetoacetate hydrolase family proteinG7068_04845Q9RPU5Positive1032316 - 103383052712.8
gntr family transcriptional regulatorG7068_04850Q8GAL4Positive1033834 - 103452325819.8
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseG7068_04855P42269Positive1034559 - 103605553875.7
3,4-dihydroxyphenylacetate 2,3-dioxygenaseG7068_04860Q8GR45Positive1036154 - 103729643146.5
gnat family n-acetyltransferaseG7068_04865Not AvailableNegative1037375 - 103791419514.3
class i sam-dependent methyltransferaseG7068_04870Q3J2B7Positive1037983 - 103905638982.7
apc family permeaseG7068_04875A2RHI9Negative1039057 - 104054152515.8
helix-turn-helix domain-containing proteinG7068_04880B1Q2A8Positive1040870 - 104181734658.9

Displaying genes 1171 – 1180 of 3275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.