Nocardioides anomalus HKS04

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides anomalus HKS04 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP049257.1, which provides a reference for its genetic information and aids in further research and identification. Nocardioides species are known for their role in soil ecosystems, where they contribute to the degradation of complex organic materials. This capability suggests that Nocardioides anomalus HKS04 may play a significant role in nutrient cycling and soil health. The presence of a single replicon could imply a more efficient regulation of gene expression, which may enhance its survival and metabolic capabilities in diverse ecological niches. Understanding the traits of Nocardioides anomalus HKS04, particularly its genomic structure, is crucial for elucidating its ecological roles and potential applications in bioremediation and biotechnology. Further studies could explore its metabolic pathways and interactions within microbial communities, contributing to our knowledge of soil microbiology and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides anomalus
StrainHKS04

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides anomalus HKS04, Complete Genome

Gene Summary

Adenine Count

686348 bp

Thymine Count

680706 bp

Guanine Count

1872187 bp

Cytosine Count

1881100 bp

Genome Length

5120341 bp

Protein-coding Genes

5053 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseG5V58_16930Not AvailableNegative3366628 - 336735425673.3
helix-turn-helix domain-containing proteinG5V58_16935Not AvailableNegative3367556 - 33677206064.31
hypothetical proteinG5V58_16940O28593Negative3368127 - 336866620502.6
duf5343 domain-containing proteinG5V58_16945O28592Negative3368669 - 336929222828.7
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseG5V58_16950Not AvailableNegative3369401 - 33695264848.68
succinyl-diaminopimelate desuccinylaseG5V58_16955A0R2G4Negative3369680 - 337072337527.2
polyketide cyclaseG5V58_16960Not AvailableNegative3370755 - 337121616031.7
llm class f420-dependent oxidoreductaseG5V58_16965P9WKN4Positive3371270 - 337212431149.6
isoleucine--trna ligaseG5V58_16970Q740U6Negative3372111 - 3375284117931.0
hypothetical proteinG5V58_16975Not AvailableNegative3375555 - 337645731322.3

Displaying genes 3381 – 3390 of 5106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.