Nocardioides anomalus HKS04

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides anomalus HKS04 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP049257.1, which provides a reference for its genetic information and aids in further research and identification. Nocardioides species are known for their role in soil ecosystems, where they contribute to the degradation of complex organic materials. This capability suggests that Nocardioides anomalus HKS04 may play a significant role in nutrient cycling and soil health. The presence of a single replicon could imply a more efficient regulation of gene expression, which may enhance its survival and metabolic capabilities in diverse ecological niches. Understanding the traits of Nocardioides anomalus HKS04, particularly its genomic structure, is crucial for elucidating its ecological roles and potential applications in bioremediation and biotechnology. Further studies could explore its metabolic pathways and interactions within microbial communities, contributing to our knowledge of soil microbiology and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides anomalus
StrainHKS04

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides anomalus HKS04, Complete Genome

Gene Summary

Adenine Count

686348 bp

Thymine Count

680706 bp

Guanine Count

1872187 bp

Cytosine Count

1881100 bp

Genome Length

5120341 bp

Protein-coding Genes

5053 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endo-1,4-beta-xylanaseG5V58_11630Q60041Positive2298363 - 229958045150.3
gfo/idh/moca family oxidoreductaseG5V58_11635Q9WYP5Negative2299622 - 230063535485.9
gfo/idh/moca family oxidoreductaseG5V58_11640O68965Negative2300632 - 230163334628.8
hypothetical proteinG5V58_11645Not AvailableNegative2301630 - 230282043526.1
carbohydrate abc transporter permeaseG5V58_11650Q9KEE9Negative2302839 - 230382235994.4
sugar abc transporter permeaseG5V58_11655O51924Negative2303819 - 230464631373.1
sugar abc transporter substrate-binding proteinG5V58_11660Q578M8Negative2304871 - 230624449944.9
arac family transcriptional regulatorG5V58_11665B5F0M9Negative2306364 - 230721531221.8
laci family transcriptional regulatorG5V58_11670P0ACQ2Positive2307263 - 230831537211.5
phytanoyl-coa dioxygenaseG5V58_11675Not AvailableNegative2308329 - 230892521344.4

Displaying genes 2321 – 2330 of 5106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.