Nocardioides anomalus HKS04

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides anomalus HKS04 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP049257.1, which provides a reference for its genetic information and aids in further research and identification. Nocardioides species are known for their role in soil ecosystems, where they contribute to the degradation of complex organic materials. This capability suggests that Nocardioides anomalus HKS04 may play a significant role in nutrient cycling and soil health. The presence of a single replicon could imply a more efficient regulation of gene expression, which may enhance its survival and metabolic capabilities in diverse ecological niches. Understanding the traits of Nocardioides anomalus HKS04, particularly its genomic structure, is crucial for elucidating its ecological roles and potential applications in bioremediation and biotechnology. Further studies could explore its metabolic pathways and interactions within microbial communities, contributing to our knowledge of soil microbiology and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides anomalus
StrainHKS04

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides anomalus HKS04, Complete Genome

Gene Summary

Adenine Count

686348 bp

Thymine Count

680706 bp

Guanine Count

1872187 bp

Cytosine Count

1881100 bp

Genome Length

5120341 bp

Protein-coding Genes

5053 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseG5V58_09930O05408Positive1960887 - 196178832393.7
atp-dependent clp protease proteolytic subunitG5V58_09935Q9X7R9Positive1961835 - 196244321952.5
atp-dependent clp protease proteolytic subunitG5V58_09940Q0SGJ6Positive1962440 - 196304221291.4
eal domain-containing proteinG5V58_09945Q9I310Negative1963046 - 196495670794.4
sdr family oxidoreductaseG5V58_09950Q7ZY31Positive1965089 - 196578724127.8
s-adenosylmethionine:trna ribosyltransferase-isomeraseG5V58_09955Q3SH62Positive1965793 - 196679735640.5
maleylpyruvate isomerase family mycothiol-dependent enzymeG5V58_09960P9WKS2Positive1966794 - 196757027387.9
helix-turn-helix transcriptional regulatorG5V58_09965P9WMH6Negative1967571 - 196787911303.5
duf2007 domain-containing proteinG5V58_09970Not AvailableNegative1967953 - 19681808571.35
voc family proteinG5V58_09975P52096Positive1968219 - 196863215451.0

Displaying genes 1981 – 1990 of 5106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.