Vibrio ziniensis ZWAL4003

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ziniensis ZWAL4003 is a bacterium characterized by possessing two replicons. This trait indicates that it has a complex genomic organization, which may influence its adaptability and survival in various environments. The genetic sequences of Vibrio ziniensis ZWAL4003 are documented under the accessions CP049331.1 and CP049332.1. The presence of multiple replicons is often associated with a range of functionalities that can enhance the bacterium's ecological fitness. This trait may allow for greater flexibility in gene regulation and the potential to harbor diverse genetic elements, including those related to antibiotic resistance or metabolic capabilities. In a broader biological context, the genomic structure of Vibrio ziniensis ZWAL4003 may facilitate its survival in fluctuating environments, potentially contributing to its role within microbial communities. Understanding the genomic architecture of such organisms can provide insights into their ecological interactions and their responses to environmental pressures. This knowledge can be pivotal in studies related to microbial ecology, pathogenicity, or biotechnological applications involving Vibrio species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ziniensis
StrainZWAL4003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ziniensis ZWAL4003
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ziniensis ZWAL4003, Complete Genome

Gene Summary

Adenine Count

913300 bp

Thymine Count

911060 bp

Guanine Count

690471 bp

Cytosine Count

692541 bp

Genome Length

3207372 bp

Protein-coding Genes

2804 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease adapter clpsG5S32_08945A5F294Negative1960970 - 196129012216.7
cold shock domain-containing protein cspdG5S32_08950Q9KSW4Positive1961807 - 19620287973.3
nadp-dependent isocitrate dehydrogenaseG5S32_08955P41561Negative1962161 - 196438980563.9
pseudouridine synthaseG5S32_08960Q87QY8Positive1964703 - 196540726404.5
alginate lyase family proteinG5S32_08965Not AvailablePositive1965487 - 196667445416.9
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseG5S32_08970P56904Negative1966666 - 196751429619.6
Trna-lysNot AvailableNot AvailablePositive1967792 - 1967867Not Available
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieG5S32_08980Q87QK5Negative1967899 - 196851022505.8
imidazole glycerol phosphate synthase subunit hisfG5S32_08985B7VGZ7Negative1968507 - 196928028254.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseG5S32_08990Q87QK7Negative1969262 - 196999926299.4

Displaying genes 1791 – 1800 of 4293 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.