Paenibacillus lycopersici 12200R-189

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus lycopersici 12200R-189 is a bacterial strain characterized by its single replicon structure, which is significant for its genomic stability and replication efficiency. This strain is cataloged under the accession number CP048209.1, indicating its presence in genomic databases for further research and analysis. As a member of the genus Paenibacillus, this strain is likely associated with plant interactions, particularly in relation to its name, which suggests a connection to tomatoes (lycopersici referring to the tomato plant, Solanum lycopersicum). Members of the Paenibacillus genus are known for various beneficial traits, including plant growth promotion and biocontrol properties. Although specific functions of strain 12200R-189 are not detailed, its classification implies potential applications in agriculture, particularly in enhancing crop resilience or productivity. Moreover, the presence of a single replicon may suggest a streamlined genetic organization, which can facilitate adaptability to environmental changes. This trait is often associated with the ability of bacteria to thrive in specific ecological niches, further indicating the potential ecological role of Paenibacillus lycopersici 12200R-189 in its native habitat. Overall, the genomic characteristics of this strain provide a foundation for understanding its potential applications in sustainable agriculture and its interactions within plant ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus lycopersici
Strain12200R-189

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus lycopersici 12200R-189, Complete Genome

Gene Summary

Adenine Count

1418512 bp

Thymine Count

1407017 bp

Guanine Count

1964759 bp

Cytosine Count

1953022 bp

Genome Length

6743310 bp

Protein-coding Genes

5723 genes

Non-Coding Genes

163 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseGXP70_27350P39128Negative6267976 - 626883032107.6
extracellular solute-binding proteinGXP70_27355A0A0H2URD6Negative6268992 - 627066562437.1
helix-turn-helix transcriptional regulatorGXP70_27360O32071Negative6270911 - 627325088686.3
glutamine--fructose-6-phosphate transaminase (isomerizing)GXP70_27365Q890U2Negative6273920 - 627575266324.7
phosphoglucosamine mutaseGXP70_27370C0ZIM8Negative6276573 - 627791947632.0
hypothetical proteinGXP70_27375O34659Negative6277940 - 627952654900.6
tigr00159 family proteinGXP70_27380Q45589Negative6279519 - 628035831366.6
anti-sigma factorGXP70_27385Q65P50Negative6280497 - 628112622826.2
rna polymerase sigma factor sigwGXP70_27390Q45585Negative6281256 - 628182222089.8
phosphoenolpyruvate carboxylaseGXP70_27395A7NLR3Negative6282294 - 6285104106896.0

Displaying genes 5471 – 5480 of 5886 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.