Paenibacillus lycopersici 12200R-189

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus lycopersici 12200R-189 is a bacterial strain characterized by its single replicon structure, which is significant for its genomic stability and replication efficiency. This strain is cataloged under the accession number CP048209.1, indicating its presence in genomic databases for further research and analysis. As a member of the genus Paenibacillus, this strain is likely associated with plant interactions, particularly in relation to its name, which suggests a connection to tomatoes (lycopersici referring to the tomato plant, Solanum lycopersicum). Members of the Paenibacillus genus are known for various beneficial traits, including plant growth promotion and biocontrol properties. Although specific functions of strain 12200R-189 are not detailed, its classification implies potential applications in agriculture, particularly in enhancing crop resilience or productivity. Moreover, the presence of a single replicon may suggest a streamlined genetic organization, which can facilitate adaptability to environmental changes. This trait is often associated with the ability of bacteria to thrive in specific ecological niches, further indicating the potential ecological role of Paenibacillus lycopersici 12200R-189 in its native habitat. Overall, the genomic characteristics of this strain provide a foundation for understanding its potential applications in sustainable agriculture and its interactions within plant ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus lycopersici
Strain12200R-189

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus lycopersici 12200R-189, Complete Genome

Gene Summary

Adenine Count

1418512 bp

Thymine Count

1407017 bp

Guanine Count

1964759 bp

Cytosine Count

1953022 bp

Genome Length

6743310 bp

Protein-coding Genes

5723 genes

Non-Coding Genes

163 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stage v sporulation protein adGXP70_09965P40869Positive2305130 - 230614635928.0
stage v sporulation protein aeGXP70_09970C0H450Positive2306170 - 230652011893.9
moxr family atpaseGXP70_09975P94474Positive2306693 - 230764935237.7
duf58 domain-containing proteinGXP70_09980P94475Positive2307655 - 230891146856.5
transglutaminase domain-containing proteinGXP70_09985P94476Positive2308908 - 231115183681.3
yqeg family had iiia-type phosphataseGXP70_09990P54452Positive2311457 - 231198419802.5
ribosome biogenesis gtpase yqehGXP70_09995P54453Positive2311981 - 231310541729.5
shikimate dehydrogenaseGXP70_10000C0ZB07Positive2313157 - 231402030539.6
ribosome assembly rna-binding protein yhbyGXP70_10005P54454Positive2314047 - 231434010988.3
nicotinate-nucleotide adenylyltransferaseGXP70_10010Q8EPV1Positive2314383 - 231497322141.6

Displaying genes 2031 – 2040 of 5886 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.