Sphingomonas lacunae CSW-10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lacunae CSW-10 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation in various environments. The genomic information for Sphingomonas lacunae CSW-10 can be accessed under the accession number CP053015.1. The rod shape and flagella presence suggest that Sphingomonas lacunae CSW-10 may be well-adapted to aquatic or semi-aquatic environments, where motility can be advantageous for nutrient acquisition or evasion of predators. The ability to move actively may also allow this bacterium to colonize specific niches, contributing to its ecological role. Understanding the characteristics of Sphingomonas lacunae CSW-10 not only enhances our knowledge of this specific bacterium but also provides insights into the broader ecological roles that rod-shaped, motile bacteria play in their environments. These traits suggest potential interactions within microbial communities, such as competition for resources or participation in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lacunae
StrainCSW-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lacunae CSW-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lacunae CSW-10, Complete Genome

Gene Summary

Adenine Count

568800 bp

Thymine Count

563352 bp

Guanine Count

927009 bp

Cytosine Count

918673 bp

Genome Length

2977834 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorGV829_03810A7ML93Negative826468 - 82850171151.2
multidrug effflux mfs transporterGV829_03815P28246Positive828598 - 82986044526.3
amino acid permeaseGV829_03820O07576Negative829936 - 83144752867.4
histidine triad nucleotide-binding proteinGV829_03825P26724Negative831611 - 83198813783.5
phosphoribosyl-atp diphosphataseGV829_03830Q1GQI3Negative832007 - 83233011298.5
imidazole glycerol phosphate synthase subunit hisfGV829_03835Q1GNC3Negative832341 - 83312926984.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseGV829_03840Q1GNC2Negative833126 - 83386025287.3
imidazole glycerol phosphate synthase subunit hishGV829_03845Q5NMD4Negative833860 - 83455224600.8
imidazoleglycerol-phosphate dehydratase hisbGV829_03850Q1GNC0Negative834482 - 83510822630.7
hypothetical proteinGV829_03855Not AvailablePositive835214 - 83570217666.8

Displaying genes 781 – 790 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.