Sphingomonas lacunae CSW-10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lacunae CSW-10 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation in various environments. The genomic information for Sphingomonas lacunae CSW-10 can be accessed under the accession number CP053015.1. The rod shape and flagella presence suggest that Sphingomonas lacunae CSW-10 may be well-adapted to aquatic or semi-aquatic environments, where motility can be advantageous for nutrient acquisition or evasion of predators. The ability to move actively may also allow this bacterium to colonize specific niches, contributing to its ecological role. Understanding the characteristics of Sphingomonas lacunae CSW-10 not only enhances our knowledge of this specific bacterium but also provides insights into the broader ecological roles that rod-shaped, motile bacteria play in their environments. These traits suggest potential interactions within microbial communities, such as competition for resources or participation in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lacunae
StrainCSW-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lacunae CSW-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lacunae CSW-10


Gene Summary

Adenine Count

568800 bp

Thymine Count

563352 bp

Guanine Count

927009 bp

Cytosine Count

918673 bp

Genome Length

2977834 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosome-binding factor rbfaGV829_04360Q1GVI8Positive949309 - 94971614816.9
thymidine kinaseGV829_04365Q2G5F0Positive949760 - 95034421148.4
gnat family n-acetyltransferaseGV829_04370P40586Positive950292 - 95089722277.7
trna pseudouridine(55) synthase trubGV829_04375Q2G5F3Positive950867 - 95185034241.5
30s ribosomal protein s15GV829_04380Q1GVQ9Positive951874 - 95214310224.5
polyribonucleotide nucleotidyltransferaseGV829_04385Q2G5F5Positive952409 - 95473383439.7
chromosome segregation protein smcGV829_04390Q6N1B7Negative954837 - 958295121719.0
thioredoxin domain-containing proteinGV829_04395Q92JN8Negative958355 - 95911026689.5
thioredoxin domain-containing proteinGV829_04400Q1RGZ5Negative959161 - 95990426455.8
duf721 domain-containing proteinGV829_04405Not AvailableNegative959958 - 96052119959.3

Displaying genes 891 – 900 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.