Sphingomonas lacunae CSW-10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lacunae CSW-10 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation in various environments. The genomic information for Sphingomonas lacunae CSW-10 can be accessed under the accession number CP053015.1. The rod shape and flagella presence suggest that Sphingomonas lacunae CSW-10 may be well-adapted to aquatic or semi-aquatic environments, where motility can be advantageous for nutrient acquisition or evasion of predators. The ability to move actively may also allow this bacterium to colonize specific niches, contributing to its ecological role. Understanding the characteristics of Sphingomonas lacunae CSW-10 not only enhances our knowledge of this specific bacterium but also provides insights into the broader ecological roles that rod-shaped, motile bacteria play in their environments. These traits suggest potential interactions within microbial communities, such as competition for resources or participation in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lacunae
StrainCSW-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lacunae CSW-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lacunae CSW-10, Complete Genome

Gene Summary

Adenine Count

568800 bp

Thymine Count

563352 bp

Guanine Count

927009 bp

Cytosine Count

918673 bp

Genome Length

2977834 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein biosynthesis integral membrane protein murjGV829_14105O05467Positive2950085 - 295166556324.6
tryptophan--trna ligaseGV829_14110Q9AC05Positive2951699 - 295269735801.1
duf4136 domain-containing proteinGV829_14115Not AvailablePositive2952859 - 295354224980.6
chromosomal replication initiator protein dnaaGV829_14120Q1GN68Negative2953645 - 295502750621.4
30s ribosomal protein s20GV829_14125Q1GN81Negative2955570 - 29558339591.83
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseGV829_14130Q1GN82Negative2955940 - 295675529510.7
class i sam-dependent methyltransferaseGV829_14135Q9X3X2Positive2956863 - 295760627753.2
2-polyprenylphenol 6-hydroxylaseGV829_14140B1XWR5Positive2957614 - 295916456688.1
type ii toxin-antitoxin system ccda family antitoxinGV829_14145P62553Positive2959217 - 29594629127.69
ccdb family proteinGV829_14150Q46996Positive2959462 - 295975810947.5

Displaying genes 2821 – 2830 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.