Sphingomonas lacunae CSW-10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lacunae CSW-10 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation in various environments. The genomic information for Sphingomonas lacunae CSW-10 can be accessed under the accession number CP053015.1. The rod shape and flagella presence suggest that Sphingomonas lacunae CSW-10 may be well-adapted to aquatic or semi-aquatic environments, where motility can be advantageous for nutrient acquisition or evasion of predators. The ability to move actively may also allow this bacterium to colonize specific niches, contributing to its ecological role. Understanding the characteristics of Sphingomonas lacunae CSW-10 not only enhances our knowledge of this specific bacterium but also provides insights into the broader ecological roles that rod-shaped, motile bacteria play in their environments. These traits suggest potential interactions within microbial communities, such as competition for resources or participation in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lacunae
StrainCSW-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lacunae CSW-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lacunae CSW-10, Complete Genome

Gene Summary

Adenine Count

568800 bp

Thymine Count

563352 bp

Guanine Count

927009 bp

Cytosine Count

918673 bp

Genome Length

2977834 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorGV829_11355Q1GUW1Positive2368248 - 236980456861.5
atp-dependent clp endopeptidase proteolytic subunit clppGV829_11360Q1GPH5Positive2369960 - 237059823441.4
atp-dependent clp protease atp-binding subunit clpxGV829_11365Q1GPH4Positive2370786 - 237205745664.1
tonb-dependent receptorGV829_11370P38370Positive2372392 - 2375646116370.0
monofunctional biosynthetic peptidoglycan transglycosylaseGV829_11375Q9ABA6Negative2375777 - 237645425054.6
arac family transcriptional regulatorGV829_11380Not AvailableNegative2376470 - 237734232016.8
rna polymerase sigma factor rpohGV829_11385P50512Negative2377612 - 237851734268.1
rlua family pseudouridine synthaseGV829_11390P50513Negative2378566 - 237952234068.1
m67 family metallopeptidaseGV829_11395D4GTS4Positive2379539 - 237997615410.2
histidine phosphotransferaseGV829_11400Q2YQA5Positive2380065 - 238070322522.3

Displaying genes 2271 – 2280 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.