Sphingomonas lacunae CSW-10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lacunae CSW-10 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation in various environments. The genomic information for Sphingomonas lacunae CSW-10 can be accessed under the accession number CP053015.1. The rod shape and flagella presence suggest that Sphingomonas lacunae CSW-10 may be well-adapted to aquatic or semi-aquatic environments, where motility can be advantageous for nutrient acquisition or evasion of predators. The ability to move actively may also allow this bacterium to colonize specific niches, contributing to its ecological role. Understanding the characteristics of Sphingomonas lacunae CSW-10 not only enhances our knowledge of this specific bacterium but also provides insights into the broader ecological roles that rod-shaped, motile bacteria play in their environments. These traits suggest potential interactions within microbial communities, such as competition for resources or participation in nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lacunae
StrainCSW-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lacunae CSW-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lacunae CSW-10, Complete Genome

Gene Summary

Adenine Count

568800 bp

Thymine Count

563352 bp

Guanine Count

927009 bp

Cytosine Count

918673 bp

Genome Length

2977834 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkaline phosphatase d family proteinGV829_07110Q8KRU5Negative1506324 - 150797059749.9
duf3667 domain-containing proteinGV829_07115Not AvailableNegative1508031 - 150913740295.1
glutamate-5-semialdehyde dehydrogenaseGV829_07120Q1GVM0Positive1509237 - 151049043080.6
ribbon-helix-helix protein, copg familyGV829_07125Q9A5D6Positive1510545 - 151085311018.1
type ii toxin-antitoxin system rele/pare family toxinGV829_07130Not AvailablePositive1510850 - 151113410457.0
nicotinate-nucleotide adenylyltransferaseGV829_07135Q2N6F4Positive1511131 - 151176023495.8
ribosome silencing factorGV829_07140Q5NLX3Positive1511764 - 151217414489.3
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhGV829_07145Q2GCB7Positive1512198 - 151262315759.9
peptidoglycan dd-metalloendopeptidase family proteinGV829_07150P44864Positive1512647 - 151383741644.2
s41 family peptidaseGV829_07155Q44879Positive1513990 - 151539650626.2

Displaying genes 1441 – 1450 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.