Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dotu family type vi secretion system proteinGT347_25065P39064Negative5420345 - 542171248172.6
type vi secretion system baseplate subunit tsskGT347_25070Q9I753Negative5421709 - 542304649065.0
duf4280 domain-containing proteinGT347_25075Not AvailableNegative5423068 - 542345413062.2
spoiie family protein phosphataseGT347_25080O34779Negative5423492 - 542428928586.7
type vi secretion system-associated fha domain protein taghGT347_25085Not AvailableNegative5424286 - 542621464973.1
hypothetical proteinGT347_25090Not AvailableNegative5426260 - 542707228568.4
hypothetical proteinGT347_25095Not AvailableNegative5427072 - 542886863671.9
duf4123 domain-containing proteinGT347_25100Not AvailableNegative5428865 - 542945220845.2
type vi secretion system tip protein vgrgGT347_25105Q9I0F3Negative5429457 - 543152975286.5
type vi secretion system atpase tsshGT347_25110Q9I742Negative5431548 - 543422097352.6

Displaying genes 5011 – 5020 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.