Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemin-degrading factorGT347_23065Q56990Positive4984914 - 498609542563.6
primary-amine oxidaseGT347_23070P46883Positive4986203 - 498807469442.5
hypothetical proteinGT347_23075P46881Positive4988074 - 49881573028.64
succinylglutamate desuccinylaseGT347_23080Not AvailableNegative4988158 - 498913835081.0
tripartite tricarboxylate transporter substrate binding proteinGT347_23085P27103Negative4989135 - 499012134442.9
lysr family transcriptional regulatorGT347_23090P39376Positive4990230 - 499112333385.3
fcd domain-containing proteinGT347_23095P37335Positive4991189 - 499214235370.5
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeGT347_23100Q9A3Q9Positive4992271 - 499361747488.9
abc transporter substrate-binding proteinGT347_23105P23847Positive4993646 - 499519956463.4
helix-turn-helix domain-containing proteinGT347_23110P42968Negative4995186 - 499600729023.2

Displaying genes 4611 – 4620 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.