Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pimeloyl-coa dehydrogenase small subunitGT347_22315Q5RAS0Negative4817354 - 481849339919.8
pimeloyl-coa dehydrogenase large subunitGT347_22320P95280Negative4818507 - 481970343918.8
acetyl-coa c-acyltransferaseGT347_22325O32177Negative4819730 - 482091141694.1
3-hydroxyacyl-coa dehydrogenaseGT347_22330Q6NYL3Negative4820974 - 482310674842.6
lysr family transcriptional regulatorGT347_22335P52689Positive4823219 - 482412133622.7
hypothetical proteinGT347_22340Not AvailableNegative4824110 - 482444211794.4
tripartite tricarboxylate transporter substrate binding proteinGT347_22345P0A177Negative4824543 - 482550233401.7
hypothetical proteinGT347_22350A0A084AFG6Negative4825566 - 482670542882.8
lysr family transcriptional regulatorGT347_22355O87883Positive4826805 - 482768331526.8
tripartite tricarboxylate transporter substrate binding proteinGT347_22360P27103Negative4827691 - 482868334819.7

Displaying genes 4461 – 4470 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.