Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c'GT347_20765P95339Positive4486950 - 44872349872.8
type ii toxin-antitoxin system rele/pare family toxinGT347_20770Not AvailableNegative4487257 - 448758012258.1
type ii toxin-antitoxin system prevent-host-death family antitoxinGT347_20775Not AvailableNegative4487577 - 448784910301.4
c4-dicarboxylate transporter dctaGT347_20780A1VKX1Negative4487976 - 448931647419.6
hypothetical proteinGT347_20785Not AvailableNegative4489383 - 448967610617.6
duf3325 family proteinGT347_20790Not AvailableNegative4490388 - 449073812014.1
pepsy domain-containing proteinGT347_20795P42514Negative4490735 - 449238459493.4
duf3649 domain-containing proteinGT347_20800Not AvailableNegative4492381 - 449276713083.1
carboxyvinyl-carboxyphosphonate phosphorylmutaseGT347_20805Q0QLE4Positive4493045 - 449392631105.3
amidohydrolase family proteinGT347_20810A6XIG7Positive4493913 - 449477331054.1

Displaying genes 4151 – 4160 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.