Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escv/yscv/hrcv family type iii secretion system export apparatus proteinGT347_19725P80150Negative4271342 - 427333070814.1
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinGT347_19730P35652Negative4273327 - 427438838075.7
hypothetical proteinGT347_19735Not AvailableNegative4274413 - 427542036728.6
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinGT347_19740Q52498Negative4275591 - 427731861923.8
dihydrofolate reductaseGT347_19745P0A547Negative4277488 - 427799418247.8
thymidylate synthaseGT347_19750Q12CI6Negative4277996 - 427884431970.8
atp-dependent helicaseGT347_19755P94593Positive4278884 - 428119084582.6
chemotaxis protein chewGT347_19760P0A966Negative4281198 - 428172518531.4
fmn-binding negative transcriptional regulatorGT347_19765P21341Negative4281755 - 428238423119.3
substrate-binding domain-containing proteinGT347_19770Q9I1F6Negative4282453 - 428350836691.3

Displaying genes 4011 – 4020 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.