Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porinGT347_17465P24305Positive3778447 - 377951437788.4
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjGT347_17470P37634Negative3779546 - 378045432557.2
50s ribosomal protein l13GT347_17475A1TUF6Positive3780642 - 378107015504.9
30s ribosomal protein s9GT347_17480A1TUF5Positive3781081 - 378147314379.4
iron-sulfur cluster insertion protein erpaGT347_17485A9C177Positive3781643 - 378201713176.4
dha2 family efflux mfs transporter permease subunitGT347_17490Q6D2A9Positive3782120 - 378356850777.2
anhydro-n-acetylmuramic acid kinaseGT347_17495C5CM20Negative3783602 - 378472638384.7
peptidoglycan dd-metalloendopeptidase family proteinGT347_17500P44693Negative3784746 - 378610748407.1
tyrosine--trna ligaseGT347_17505Q475S5Positive3786321 - 378755344617.5
lysr family transcriptional regulatorGT347_17510P0A9F8Negative3787558 - 378854135941.9

Displaying genes 3561 – 3570 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.