Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidohydrolase family proteinGT347_14080P72349Positive3072102 - 307356551207.8
yifb family mg chelatase-like aaa atpaseGT347_14085P57015Negative3073569 - 307510454246.4
hypothetical proteinGT347_14090Not AvailablePositive3075384 - 307611826200.6
p-ii family nitrogen regulatorGT347_14095Q53044Positive3076181 - 307651912305.0
ammonium transporterGT347_14100P69680Positive3076546 - 307812353381.1
smp-30/gluconolactonase/lre family proteinGT347_14105P0DOV6Positive3078284 - 307922534567.9
glycolate oxidase subunit glceGT347_14110P52073Positive3079324 - 308043939224.8
duf1275 domain-containing proteinGT347_14115O34343Positive3080446 - 308125529117.5
glycolate oxidase subunit glcfGT347_14120P52074Positive3081280 - 308255445713.3
hypothetical proteinGT347_14125Q0I476Positive3082508 - 308345533654.4

Displaying genes 2911 – 2920 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.