Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter large permease subunitGT347_10925Q312S1Negative2364399 - 236628265909.5
twin-arginine translocation signal domain-containing proteinGT347_10930Q16BC9Negative2366313 - 236734737720.8
serine-type d-ala-d-ala carboxypeptidaseGT347_10935P08506Negative2367467 - 236873244121.9
dna/rna non-specific endonucleaseGT347_10940P81203Negative2368821 - 236958527311.2
isocitrate/isopropylmalate dehydrogenase family proteinGT347_10945O29627Negative2369764 - 237081337371.9
tripartite tricarboxylate transporter substrate binding proteinGT347_10950P27103Negative2370851 - 237177131931.6
fcd domain-containing proteinGT347_10955O05494Negative2371898 - 237256024166.7
helix-turn-helix domain-containing proteinGT347_10960P77300Negative2372606 - 237337026524.9
tripartite tricarboxylate transporter substrate binding proteinGT347_10965P27103Positive2373472 - 237445233920.1
extracellular solute-binding proteinGT347_10970A0A0A1H8I4Negative2374461 - 237517724370.4

Displaying genes 2281 – 2290 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.